Organism - Lactobacillus casei ATCC 334


NCBI Taxonomy Identifier - 321967

NCBI Genome - 321967

Number of regulators - 65

Number of target genes - 131


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Regulators:


Regulator Name Regulator Mechanism Regulator UniProt Accession
ccpa Transcription Factor Q03AX7
ccpb Transcription Factor Q035V9
ccpn Transcription Factor Q035P3
cggr Transcription Factor Q03AK8
ctsr Transcription Factor Q034W8
fabt Transcription Factor Q036K2
fatr Transcription Factor Q03CZ7
flpa Transcription Factor Q03CY5
fmn RNA No data
frur Unknown Q039J4
galr Transcription Factor Q03BB5
glnr Transcription Factor Q038E6
gntr1 Transcription Factor Q03CI3
gutr Transcription Factor Q034D2
hrca Transcription Factor Q038N1
l10_leader RNA No data
l13_leader RNA No data
l19_leader RNA No data
l20_leader RNA No data
l21_leader RNA No data
lacr Transcription Factor Q03BA1
lp_3221 Transcription Factor Q036L9
lsei_0081 Transcription Factor Q03CX7
lsei_0368 Transcription Factor Q03C45
lysine RNA No data
mdxr Transcription Factor Q03AJ5
mler Transcription Factor Q03B46
mntr Transcription Factor Q03B09
mtlr Transcription Factor Q033M7
nagr Transcription Factor Q037P5
niar Transcription Factor Q03AX9
nrdr Transcription Factor Q037Z3
nrtr Transcription Factor Q033Z0
oglr2 Transcription Factor Q03C16
perr Transcription Factor Q03AU6
preq1-ii RNA No data
purr Transcription Factor Q034R4
pyrr Protein - transcriptional antiterminator conditioned by a metabolite No data
rbsr Transcription Factor Q03CA6
rpir Transcription Factor Q035R2
smk_box_riboswitch RNA No data
t-box(ala) RNA No data
t-box(arg) RNA No data
t-box(asp) RNA No data
t-box(gly) RNA No data
t-box(his) RNA No data
t-box(ile) RNA No data
t-box(leu) RNA No data
t-box(met) RNA No data
t-box(phe) RNA No data
t-box(pro) RNA No data
t-box(ser) RNA No data
t-box(thr) RNA No data
t-box(trp) RNA No data
t-box(tyr) RNA No data
t-box(val) RNA No data
tagr Transcription Factor Q034J7
thf RNA No data
tpp RNA No data
trer Transcription Factor Q03BF1
yhcf Transcription Factor Q037I3
ytra Transcription Factor Q035Y4
yxer Transcription Factor Q03C22
yybp-ykoy RNA No data
zur Transcription Factor Q036U2


ProTReND 2019              University of Minho              Centre of Biological Engineering              Biosystems