Organism - Bacillus subtilis subsp. subtilis str. 168


NCBI Taxonomy Identifier - 224308

NCBI Genome - 224308

Number of regulators - 340

Number of target genes - 3319


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Regulators:


Regulator Name Regulator Mechanism Regulator UniProt Accession
*l21_leader* RNA No data
*rna - cobalamin* Binding of metabolite to a RNA inferred by RegPrecise No data
*rna - ykkc-yxkd* Binding of metabolite to a RNA inferred by RegPrecise No data
*rna - ylbh* Binding of metabolite to a RNA inferred by RegPrecise No data
*rna - yybp-ykoy* Binding of metabolite to a RNA inferred by RegPrecise No data
*rplj* RNA No data
*rplm* RNA No data
*rpls* RNA No data
*yhdi/ydel* Transcription Factor No data
*yvbf/yvav* Transcription Factor No data
a-box-ade riboswitch No data
abh Transcription Factor P39758
abrb Transcription Factor P08874
acor Transcription Factor O31551
adaa Transcription Factor P19219
ader Transcription Factor P71073
adhr Transcription Factor O06008
ahrc Transcription Factor P17893
alar Transcription Factor O05236
alsr Transcription Factor Q04778
ansr Transcription Factor Q07683
arar Transcription Factor P96711
arfm Transcription Factor P46910
argr Transcription Factor P17893
arsr Transcription Factor P45949
as-yont RNA No data
aser Transcription Factor P96677
azlb Transcription Factor O07920
bcer Transcription Factor O34951
bglr Transcription Factor Q45591
bglz Transcription Factor O31690
bira Transcription Factor P0CI75
bkdr Transcription Factor P54529
bltr Transcription Factor P39842
bmrr Transcription Factor P39075
bsda Transcription Factor P94403
btr Transcription Factor P40408
catr Transcription Factor O32238
ccpa Transcription Factor P25144
ccpb Transcription Factor P37517
ccpc Transcription Factor O34827
ccpn Transcription Factor O34994
cggr Transcription Factor O32253
citb riboswitch No data
citr Transcription Factor P39127
citt Transcription Factor O34534
cobalamin RNA No data
cody Transcription Factor P39779
coma Transcription Factor P14204
comk Transcription Factor P40396
comn Protein post-transcriptional control No data
comz Transcription Factor O32437
csor Transcription Factor O32222
csra RNA No data
cssr Transcription Factor O32192
ctp-box RNA No data
ctsr Transcription Factor P37568
cuer Transcription Factor O07586
cymr Transcription Factor O34527
cysl Transcription Factor P39647
czra Transcription Factor O31844
dctr Transcription Factor P96602
degu Transcription Factor P13800
deor Transcription Factor P39140
desr Transcription Factor O34723
dnaa Transcription Factor P05648
ear RNA No data
exur Transcription Factor Q9JMQ1
fadr Transcription Factor P94548
fapr Transcription Factor O34835
fatr Transcription Factor O08335
fmn RNA No data
fmn-box riboswitch No data
fnr Transcription Factor P46908
frlr Transcription Factor O32152
frur Unknown O31713
fsra RNA No data
fur Transcription Factor P54574
g-box-gua riboswitch No data
g-box-hxtx riboswitch No data
gabr Transcription Factor P94426
gamr Transcription Factor O31459
ganr Transcription Factor O07008
gbsr (yuac) Transcription Factor P71015
gere Transcription Factor P11470
gerr Transcription Factor O34549
glcr Transcription Factor P94591
glct Protein - transcriptional antiterminator conditioned by a PTS phosphorylation No data
glms RNA No data
glms ribozyme riboswitch (glmS ribozyme) No data
glnl Transcription Factor P40759
glnr Transcription Factor P37582
glpp Protein - transcriptional antiterminator conditioned by a PTS phosphorylation P30300
gltc Transcription Factor P20668
gltc2 Transcription Factor P20668
gltr Unknown P94501
glvr Transcription Factor P54717
gly-box riboswitch No data
glycine RNA No data
gmur Transcription Factor O05509
gntr Transcription Factor P10585
gudr Transcription Factor P42239
gutr Transcription Factor P39143
hbs Transcription Factor P08821
hisr Transcription Factor Q7BVT7
hpr Transcription Factor P11065
hrca Transcription Factor P25499
htra Transcription Factor O34358
hutp Protein - transcriptional antiterminator conditioned by a metabolite No data
hxlr Transcription Factor P42406
hypr Transcription Factor P37486
immr Transcription Factor P96631
iolr Transcription Factor P46337
iolr1 Transcription Factor P37947
ipi Transcription Factor P39804
kdgr Transcription Factor P50844
kipr Transcription Factor P42968
l-box-lys riboswitch No data
l10_leader RNA No data
l13_leader RNA No data
l19_leader RNA No data
l20_leader RNA No data
l21_leader RNA No data
lacr Transcription Factor O07008
levr Transcription Factor P23914
lexa Transcription Factor P31080
liar Transcription Factor O32197
licr Transcription Factor P46321
lict Protein - transcriptional antiterminator conditioned by a PTS phosphorylation P39805
lmra Transcription Factor O34619
lrpa Transcription Factor P96652
lutr Transcription Factor O07007
lysine RNA No data
lytr Transcription Factor Q02115
lytt Transcription Factor P94514
m-box riboswitch No data
malr Transcription Factor O05251
manr Transcription Factor O31644
mdtr Transcription Factor O32181
mdxr Transcription Factor O06987
med Accessory protein involved in regulation No data
mgsr Transcription Factor P54503
mhqr Transcription Factor O31672
mifm Regulation of translation by ribosomes No data
mntr Transcription Factor P54512
msmr Transcription Factor O34829
mta Transcription Factor P71039
mtlr Transcription Factor P96574
mtrb Transcription Factor P19466
murr Transcription Factor Q45581
nadr Transcription Factor P39667
nagr Transcription Factor O34817
natr Transcription Factor P70955
niar Transcription Factor P39667
nrdr Transcription Factor Q45549
nsrr Transcription Factor O07573
nsrr Transcription Factor O07573
ntdr Transcription Factor O07567
ohrr Transcription Factor O34777
padr Transcription Factor P94443
paib Unknown P21341
paib Unknown No data
perr Transcription Factor P71086
phop Transcription Factor P13792
pksa Transcription Factor O34381
preq1 RNA No data
preq1 riboswitch riboswitch No data
pucr Transcription Factor O32138
purine RNA No data
purr Transcription Factor P37551
putr Transcription Factor P94393
pyrr Protein - transcriptional antiterminator conditioned by a metabolite No data
qdor Transcription Factor P42105
rata RNA No data
rbsr Transcription Factor P36944
resd Transcription Factor P35163
rex Transcription Factor O05521
rhar Transcription Factor O05261
rhgr Transcription Factor O31522
rmgr Transcription Factor O32071
rocr Transcription Factor P38022
rok Transcription Factor O34857
rplt RNA P55873
rsfa Accessory protein involved in regulation P39650
rsfa Accessory protein involved in regulation No data
s-box-sam riboswitch No data
sact Protein - transcriptional antiterminator conditioned by a PTS phosphorylation P26212
sacy Protein - transcriptional antiterminator conditioned by a PTS phosphorylation P15401
sala Accessory protein involved in regulation P50863
sala Accessory protein involved in regulation No data
sam RNA No data
sdpr Transcription Factor O32242
sens Transcription Factor P21344
siga Sigma Factor P06224
sigb Sigma Factor P06574
sigd Sigma Factor P10726
sige Sigma Factor P06222
sigf Sigma Factor P07860
sigg Sigma Factor P19940
sigh Sigma Factor P17869
sigi Sigma Factor O31654
sigk Sigma Factor P12254
sigl Sigma Factor P24219
sigm Sigma Factor O07582
sigv Sigma Factor O05404
sigw Sigma Factor Q45585
sigx Sigma Factor P35165
sigy Sigma Factor P94370
sinr Transcription Factor P06533
sknr Transcription Factor P45902
slrr Transcription Factor P71049
spla Transcription Factor P37955
spo0a Transcription Factor P06534
spoiiid Transcription Factor P15281
spovt Transcription Factor P37554
spx Transcription Factor O31602
sr1 RNA No data
stringent response Unknown No data
t-box(ala) RNA No data
t-box(asn) RNA No data
t-box(cys) RNA No data
t-box(gly) RNA No data
t-box(ile) RNA No data
t-box(leu) RNA No data
t-box(phe) RNA No data
t-box(pro) RNA No data
t-box(ser) RNA No data
t-box(thr) RNA No data
t-box(trp) RNA No data
t-box(tyr) RNA No data
t-box(val) RNA No data
t-box-ala RNA No data
t-box-arg RNA No data
t-box-asp RNA No data
t-box-cys RNA No data
t-box-gln RNA No data
t-box-gly RNA No data
t-box-his RNA No data
t-box-ile RNA No data
t-box-leu RNA No data
t-box-phe RNA No data
t-box-pro RNA No data
t-box-ser RNA No data
t-box-thr RNA No data
t-box-trp RNA No data
t-box-tyr RNA No data
t-box-val RNA No data
t-o2 Unknown No data
thi-box riboswitch No data
tnra Transcription Factor Q45666
tpp RNA No data
trap RNA No data
trer Transcription Factor P39796
xpf Transcription Factor P39784
xre Transcription Factor P23789
xylr Transcription Factor P94490
yabj Transcription Factor P37552
ybfi Transcription Factor O31449
ybfp Transcription Factor O31456
ybzh Transcription Factor C0H3S9
ycba Transcription Factor P40758
ycek Transcription Factor O34464
ycge Transcription Factor O31472
ycgk Transcription Factor P94387
yclj Transcription Factor P94413
ycnc Transcription Factor P94423
ycnk Transcription Factor P94433
ycxd Transcription Factor Q08792
yczg Transcription Factor O31480
ydao riboswitch riboswitch No data
ydao-yuaa RNA No data
ydeb Transcription Factor P96659
ydec Transcription Factor P96660
ydee Transcription Factor P96662
ydef Transcription Factor P96663
ydep Transcription Factor P96673
ydes Transcription Factor P96676
ydff Transcription Factor P96683
ydfi Transcription Factor P96686
ydfl Transcription Factor P96690
ydgg Transcription Factor P96705
ydgj Transcription Factor P96708
ydhc Transcription Factor O05494
ydzf Transcription Factor O31494
yetl Transcription Factor O31541
yeze Transcription Factor Q7WY76
yfhp Unknown No data
yfir Transcription Factor O31560
yfiv Transcription Factor O31564
yfmp Transcription Factor O06474
yhbi Transcription Factor O31592
yhcf Transcription Factor P54590
yhgd Transcription Factor P32398
yisr Transcription Factor P40331
ykkc-yxkd RNA No data
ykok RNA No data
ykom Transcription Factor O34949
ykrk Transcription Factor O31656
ykvn Transcription Factor O31679
ylac Transcription Factor O07627
ylbh RNA No data
ymfc Transcription Factor O31761
yoau Transcription Factor O34701
yobd Transcription Factor O34647
yobq Transcription Factor O34901
yodb Transcription Factor O34844
yofa Transcription Factor O34685
yozg Transcription Factor O31834
yplp Transcription Factor P54156
ypop Transcription Factor P54182
yqfl Unknown No data
yran Transcription Factor O07906
yrkd Transcription Factor P54431
yrkp Transcription Factor P54443
ysmb Transcription Factor P97247
ytcd Transcription Factor O34533
ytli Transcription Factor O35038
ytra Transcription Factor O34712
ytze Transcription Factor O32067
yvan Transcription Factor O32236
yvao Transcription Factor O32237
yvcp Transcription Factor O06978
yvdt Transcription Factor O07001
yvfu Transcription Factor O07019
yvkb Transcription Factor O34643
yvrhb Transcription Factor No data
yvri Transcription Factor O34843
yvri-yvrha Sigma Factor No data
ywae Transcription Factor P25150
ywbi Transcription Factor P39592
ywcc Transcription Factor P39601
ywha Transcription Factor P70993
ywoh Transcription Factor P94578
ywqm Transcription Factor P96725
ywrc Transcription Factor O05217
yxdj Transcription Factor P42421
yxjo Transcription Factor P55181
yyan Transcription Factor P37510
yyba Transcription Factor P37503
yybe Transcription Factor P37499
yybp-ykoy RNA No data
yycf Transcription Factor P37478
zur Transcription Factor P54479


ProTReND 2019              University of Minho              Centre of Biological Engineering              Biosystems