Acetobacter pasteurianus IFO 3283-01 Acidithiobacillus ferrooxidans ATCC 23270 Acidobacterium capsulatum ATCC 51196 Acidothermus cellulolyticus 11B Acidovorax citrulli AAC00-1 Acidovorax sp. JS42 Acinetobacter baumannii AB0057 Acinetobacter baumannii ATCC 17978 Acinetobacter sp. ADP1 Actinobacillus pleuropneumoniae serovar 5b str. L20 Actinobacillus pleuropneumoniae serovar 7 str. AP76 Actinobacillus succinogenes 130Z Actinosynnema mirum DSM 43827 Aeromonas hydrophila subsp. hydrophila ATCC 7966 Aeromonas salmonicida subsp. salmonicida A449 Aggregatibacter aphrophilus NJ8700 Agrobacterium fabrum str. C58 Agrobacterium tumefaciens Alcanivorax borkumensis SK2 Aliivibrio fischeri ES114 Aliivibrio fischeri MJ11 Aliivibrio salmonicida LFI1238 Alkaliphilus oremlandii OhILAs Alteromonadales bacterium TW-7 Alteromonas macleodii Anoxybacillus flavithermus WK1 Archaeoglobus fulgidus DSM 4304 Archaeoglobus profundus DSM 5631 Aromatoleum aromaticum EbN1 Arthrobacter sp. FB24 Azorhizobium caulinodans ORS 571 Azospirillum sp. B510 Azotobacter vinelandii DJ

Bacillus anthracis str. Sterne Bacillus cereus ATCC 14579 Bacillus clausii KSM-K16 Bacillus halodurans C-125 Bacillus licheniformis DSM 13 = ATCC 14580 Bacillus pumilus SAFR-032 Bacillus subtilis subsp. subtilis str. 168 Bacillus velezensis FZB42 Bacteroides cellulosilyticus DSM 14838 Bacteroides coprophilus DSM 18228 = JCM 13818 Bacteroides dorei DSM 17855 Bacteroides eggerthii DSM 20697 Bacteroides fragilis NCTC 9343 Bacteroides ovatus ATCC 8483 Bacteroides plebeius DSM 17135 Bacteroides stercoris ATCC 43183 Bacteroides thetaiotaomicron VPI-5482 Bacteroides uniformis ATCC 8492 Bacteroides vulgatus ATCC 8482 Bartonella quintana str. Toulouse Bdellovibrio bacteriovorus HD100 Bermanella marisrubri Beutenbergia cavernae DSM 12333 Bifidobacterium adolescentis ATCC 15703 Bifidobacterium angulatum DSM 20098 = JCM 7096 Bifidobacterium animalis subsp. lactis AD011 Bifidobacterium bifidum NCIMB 41171 Bifidobacterium breve DSM 20213 = JCM 1192 Bifidobacterium dentium Bd1 Bifidobacterium gallicum DSM 20093 = LMG 11596 Bifidobacterium longum NCC2705 Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 Blastopirellula marina DSM 3645 Blautia hansenii DSM 20583 Bordetella avium 197N Bordetella bronchiseptica RB50 Bordetella pertussis CS Bordetella petrii DSM 12804 Borreliella burgdorferi 297 Brachybacterium faecium DSM 4810 Bradyrhizobium diazoefficiens USDA 110 Bradyrhizobium sp. BTAi1 Brucella melitensis bv. 1 str. 16M Burkholderia ambifaria AMMD Burkholderia glumae BGR1 Burkholderia lata Burkholderia mallei ATCC 23344 Burkholderia pseudomallei 1026b Burkholderia pseudomallei K96243 Burkholderia thailandensis E264 Burkholderia vietnamiensis G4 [Bacteroides] pectinophilus ATCC 43243

Caldanaerobacter subterraneus subsp. tengcongensis MB4 Caldicellulosiruptor bescii DSM 6725 Caldicellulosiruptor saccharolyticus DSM 8903 Campylobacter coli RM2228 Campylobacter jejuni subsp. jejuni 81-176 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 Campylobacter lari RM2100 Campylobacter upsaliensis RM3195 Candidatus Protochlamydia amoebophila UWE25 Carboxydothermus hydrogenoformans Z-2901 Caulobacter segnis ATCC 21756 Caulobacter sp. K31 Caulobacter vibrioides CB15 Caulobacter vibrioides NA1000 Cellvibrio japonicus Ueda107 Chelativorans sp. BNC1 Chitinophaga pinensis DSM 2588 Chlamydia abortus S26/3 Chlamydia caviae GPIC Chlamydia felis Fe/C-56 Chlamydia muridarum Nigg Chlamydia pneumoniae AR39 Chlamydia pneumoniae CWL029 Chlamydia trachomatis D/UW-3/CX Chlorobaculum parvum NCIB 8327 Chlorobium chlorochromatii CaD3 Chlorobium ferrooxidans DSM 13031 Chlorobium limicola DSM 245 Chlorobium phaeobacteroides BS1 Chlorobium phaeobacteroides DSM 266 Chlorobium phaeovibrioides DSM 265 Chloroflexus aggregans DSM 9485 Chloroflexus aurantiacus Y-400-fl Chloroherpeton thalassium ATCC 35110 Chromobacterium violaceum ATCC 12472 Chromohalobacter salexigens DSM 3043 Citrobacter koseri ATCC BAA-895 Citrobacter rodentium ICC168 Clavibacter michiganensis subsp. michiganensis NCPPB 382 Clostridiales bacterium 1_7_47FAA Clostridioides difficile 630 Clostridioides difficile R20291 Clostridium acetobutylicum ATCC 824 Clostridium beijerinckii NCIMB 8052 Clostridium botulinum A str. ATCC 3502 Clostridium butyricum 5521 Clostridium kluyveri DSM 555 Clostridium novyi NT Clostridium perfringens ATCC 13124 Clostridium sp. L2-50 Clostridium sp. SS2/1 Clostridium tetani E88 Colwellia psychrerythraea 34H Comamonas testosteroni KF-1 Corynebacterium amycolatum SK46 Corynebacterium aurimucosum ATCC 700975 Corynebacterium diphtheriae NCTC 13129 Corynebacterium efficiens YS-314 Corynebacterium glutamicum ATCC 13032 Corynebacterium glutamicum R Corynebacterium jeikeium K411 Corynebacterium kroppenstedtii DSM 44385 Corynebacterium urealyticum DSM 7109 Croceibacter atlanticus HTCC2559 Cupriavidus metallidurans CH34 Cupriavidus necator H16 Cupriavidus pinatubonensis JMP134 Cupriavidus taiwanensis Cutibacterium acnes KPA171202 Cyanothece sp. ATCC 51142 Cyanothece sp. PCC 7425 Cyanothece sp. PCC 8801 Cytophaga hutchinsonii ATCC 33406 [Clostridium] bolteae ATCC BAA-613 [Clostridium] hiranonis DSM 13275 [Clostridium] leptum DSM 753 [Clostridium] scindens ATCC 35704

Dechloromonas aromatica RCB Dehalococcoides mccartyi 195 Deinococcus deserti VCD115 Deinococcus geothermalis DSM 11300 Deinococcus radiodurans R1 Delftia acidovorans SPH-1 Desulfohalobium retbaense DSM 5692 Desulfomicrobium baculatum DSM 4028 Desulfovibrio alaskensis G20 Desulfovibrio desulfuricans ATCC 27774 Desulfovibrio magneticus RS-1 Desulfovibrio piger ATCC 29098 Desulfovibrio salexigens DSM 2638 Desulfovibrio vulgaris Hildenborough Desulfovibrio vulgaris str. 'Miyazaki F' Desulfuromonas acetoxidans DSM 684 Dickeya dadantii 3937 Dorea formicigenerans ATCC 27755 Dorea longicatena DSM 13814 Dyadobacter fermentans DSM 18053

Edwardsiella tarda EIB202 Enterobacter sp. 638 Enterococcus faecalis V583 Erwinia amylovora ATCC 49946 Erythrobacter litoralis HTCC2594 Erythrobacter sp. NAP1 Escherichia coli BL21(DE3) Escherichia coli str. K-12 substr. MG1655 Escherichia coli str. K-12 substr. W3110 [Eubacterium] eligens ATCC 27750 [Eubacterium] rectale ATCC 33656

Ferroglobus placidus DSM 10642 Fervidobacterium nodosum Rt17-B1 Fibrobacter succinogenes subsp. succinogenes S85 Flavobacteria bacterium BAL38 Flavobacteria bacterium BBFL7 Flavobacteriales bacterium ALC-1 Flavobacterium johnsoniae UW101 Francisella philomiragia subsp. philomiragia ATCC 25017 Francisella tularensis subsp. novicida FTE Francisella tularensis subsp. tularensis SCHU S4 Frankia casuarinae Frankia sp. EAN1pec

Gardnerella vaginalis 409-05 Geobacillus kaustophilus HTA426 Geobacter daltonii FRC-32 Geobacter lovleyi SZ Geobacter metallireducens GS-15 Geobacter sp. M21 Geobacter sulfurreducens PCA Geobacter uraniireducens Rf4 Glaciecola sp. HTCC2999 Glaesserella parasuis SH0165 Gloeobacter violaceus PCC 7421 Gluconacetobacter diazotrophicus PA1 5 Gluconobacter oxydans 621H Gramella forsetii KT0803 Granulibacter bethesdensis CGDNIH1

Haemophilus influenzae Rd KW20 Hahella chejuensis KCTC 2396 Haloarcula marismortui ATCC 43049 Halobacterium salinarum R1 Halobacterium sp. NRC-1 Haloferax volcanii DS2 Halomicrobium mukohataei DSM 12286 Haloquadratum walsbyi DSM 16790 Halorubrum lacusprofundi ATCC 49239 Haloterrigena turkmenica DSM 5511 Helicobacter acinonychis str. Sheeba Helicobacter hepaticus ATCC 51449 Helicobacter mustelae 12198 Helicobacter pylori 26695 Helicobacter pylori G27 Helicobacter pylori HPAG1 Helicobacter pylori J99 Herpetosiphon aurantiacus DSM 785 Histophilus somni 2336 Hyphomonas neptunium ATCC 15444 [Haemophilus] ducreyi 35000HP

Idiomarina baltica OS145 Idiomarina loihiensis L2TR Intestinibacter bartlettii DSM 16795

Janibacter sp. HTCC2649 Jannaschia sp. CCS1 Jonesia denitrificans DSM 20603

Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Kocuria rhizophila DC2201 Kordia algicida OT-1 Kosmotoga olearia TBF 19.5.1 Kytococcus sedentarius DSM 20547

Lachnoclostridium phytofermentans ISDg Lactobacillus acidophilus NCFM Lactobacillus brevis ATCC 367 Lactobacillus casei ATCC 334 Lactobacillus casei BL23 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Lactobacillus fermentum IFO 3956 Lactobacillus helveticus DPC 4571 Lactobacillus johnsonii NCC 533 Lactobacillus plantarum WCFS1 Lactobacillus reuteri JCM 1112 Lactobacillus rhamnosus GG Lactobacillus sakei subsp. sakei 23K Lactobacillus salivarius UCC118 Lactococcus lactis subsp. cremoris MG1363 Lactococcus lactis subsp. cremoris SK11 Lactococcus lactis subsp. lactis Il1403 Laribacter hongkongensis HLHK9 Lawsonia intracellularis PHE/MN1-00 Leeuwenhoekiella blandensis MED217 Leifsonia xyli subsp. xyli str. CTCB07 Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 Leptospira interrogans serovar Lai str. 56601 Leptothrix cholodnii SP-6 Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Listeria innocua Clip11262 Listeria monocytogenes 10403S Listeria monocytogenes EGD-e Listeria welshimeri serovar 6b str. SLCC5334

Macrococcus caseolyticus JCSC5402 Magnetococcus marinus MC-1 Magnetospirillum magneticum AMB-1 Magnetospirillum magnetotacticum MS-1 Maribacter sp. HTCC2170 Marinobacter sp. ELB17 Marinomonas sp. MWYL1 Maritimibacter alkaliphilus HTCC2654 Marvinbryantia formatexigens DSM 14469 Mesorhizobium japonicum MAFF 303099 Metallosphaera sedula DSM 5348 Methanobrevibacter ruminantium M1 Methanobrevibacter smithii ATCC 35061 Methanobrevibacter smithii DSM 2375 Methanococcoides burtonii DSM 6242 Methanocorpusculum labreanum Z Methanoculleus marisnigri JR1 Methanohalophilus mahii DSM 5219 Methanoregula boonei 6A8 Methanosarcina acetivorans C2A Methanosarcina barkeri str. Fusaro Methanosarcina mazei Go1 Methanosphaera stadtmanae DSM 3091 Methanosphaerula palustris E1-9c Methanospirillum hungatei JF-1 Methanothermobacter thermautotrophicus str. Delta H Methanothrix thermoacetophila PT Methylibium petroleiphilum PM1 Methylobacillus flagellatus KT Methylophilales bacterium HTCC2181 Methylotenera mobilis JLW8 Microcystis aeruginosa NIES-843 Microscilla marina ATCC 23134 Moorella thermoacetica ATCC 39073 Moritella sp. PE36 Mycobacterium avium 104 Mycobacterium avium subsp. paratuberculosis K-10 Mycobacterium leprae TN Mycobacterium marinum M Mycobacterium sp. JLS Mycobacterium sp. KMS Mycobacterium tuberculosis H37Rv Mycobacterium ulcerans Agy99 Mycobacteroides abscessus ATCC 19977 Mycolicibacterium gilvum PYR-GCK Mycolicibacterium smegmatis MC2 155 Mycolicibacterium vanbaalenii PYR-1 Myxococcus xanthus DK 1622 [Mannheimia] succiniciproducens MBEL55E

Nakamurella multipartita DSM 44233 Natrialba magadii ATCC 43099 Natronomonas pharaonis DSM 2160 Neisseria gonorrhoeae FA 1090 Neisseria meningitidis MC58 Neptuniibacter caesariensis Nitrobacter winogradskyi Nb-255 Nitrosomonas europaea ATCC 19718 Nitrosospira multiformis ATCC 25196 Nocardia farcinica IFM 10152 Nocardioides sp. JS614 Nostoc sp. PCC 7120 Novosphingobium aromaticivorans DSM 12444

Oceanicaulis sp. HTCC2633 Oceanicola granulosus HTCC2516 Oceanobacillus iheyensis HTE831 Oenococcus oeni PSU-1

Paenarthrobacter aurescens TC1 Paenibacillus sp. JDR-2 Paraburkholderia phymatum STM815 Paraburkholderia xenovorans LB400 Paracoccus denitrificans PD1222 Pasteurella multocida subsp. multocida str. Pm70 Pectobacterium atrosepticum SCRI1043 Pectobacterium carotovorum subsp. carotovorum PCC21 Pediococcus pentosaceus ATCC 25745 Pedobacter heparinus DSM 2366 Pedobacter sp. BAL39 Pelobacter carbinolicus str. DSM 2380 Pelobacter propionicus DSM 2379 Pelodictyon luteolum DSM 273 Pelodictyon phaeoclathratiforme BU-1 Petrotoga mobilis SJ95 Phenylobacterium zucineum HLK1 Photobacterium angustum S14 Photobacterium profundum SS9 Photorhabdus laumondii subsp. laumondii TTO1 Picrophilus torridus DSM 9790 Pirellula staleyi DSM 6068 Planctomyces maris DSM 8797 Polaribacter irgensii 23-P Polaribacter sp. MED152 Polaromonas naphthalenivorans CJ2 Polaromonas sp. JS666 Prochlorococcus marinus str. MIT 9313 Prosthecochloris aestuarii DSM 271 Proteus mirabilis HI4320 Pseudarthrobacter chlorophenolicus A6 Pseudoalteromonas atlantica T6c Pseudoalteromonas haloplanktis TAC125 Pseudoalteromonas tunicata D2 Pseudomonas aeruginosa M18 Pseudomonas aeruginosa PA103 Pseudomonas aeruginosa PAK Pseudomonas aeruginosa PAO1 Pseudomonas aeruginosa UCBPP-PA14 Pseudomonas entomophila L48 Pseudomonas fluorescens Pf0-1 Pseudomonas mendocina ymp Pseudomonas protegens Pf-5 Pseudomonas putida Pseudomonas putida DOT-T1E Pseudomonas putida KT2440 Pseudomonas putida S16 Pseudomonas sp. ADP Pseudomonas stutzeri A1501 Pseudomonas syringae pv. syringae B728a Pseudomonas syringae pv. tomato str. DC3000 Pseudooceanicola batsensis HTCC2597 Pseudothermotoga lettingae TMO Psychrobacter arcticus 273-4 Psychrobacter sp. PRwf-1 Psychromonas ingrahamii 37 Psychromonas sp. CNPT3 Pyrobaculum aerophilum str. IM2 Pyrobaculum arsenaticum DSM 13514 Pyrobaculum calidifontis JCM 11548 Pyrobaculum islandicum DSM 4184 Pyrobaculum neutrophilum V24Sta Pyrococcus abyssi GE5 Pyrococcus furiosus DSM 3638 Pyrococcus horikoshii OT3

Ralstonia pickettii 12J Ralstonia solanacearum GMI1000 Reinekea blandensis MED297 Renibacterium salmoninarum ATCC 33209 Rhizobium etli CFN 42 Rhizobium leguminosarum bv. viciae 3841 Rhodobacter capsulatus SB 1003 Rhodobacter sphaeroides 2.4.1 Rhodobacter sphaeroides ATCC 17029 Rhodococcus erythropolis PR4 Rhodococcus jostii RHA1 Rhodococcus opacus B4 Rhodoferax ferrireducens T118 Rhodopirellula baltica SH 1 Rhodopseudomonas palustris CGA009 Rhodospirillum centenum SW Rhodospirillum rubrum ATCC 11170 Roseburia intestinalis L1-82 Roseiflexus castenholzii DSM 13941 Roseiflexus sp. RS-1 Roseobacter sp. MED193 Roseovarius nubinhibens ISM Roseovarius sp. 217 Ruegeria pomeroyi DSS-3 Ruegeria sp. TM1040 Ruminiclostridium cellulolyticum H10 Ruminococcus lactaris ATCC 29176 [Ruminococcus] gnavus ATCC 29149

Saccharolobus solfataricus P2 Saccharomonospora viridis DSM 43017 Saccharophagus degradans 2-40 Saccharopolyspora erythraea NRRL 2338 Salmonella enterica subsp. enterica serovar Typhi str. Ty2 Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Serratia proteamaculans 568 Shewanella amazonensis SB2B Shewanella baltica OS155 Shewanella denitrificans OS217 Shewanella frigidimarina NCIMB 400 Shewanella halifaxensis HAW-EB4 Shewanella loihica PV-4 Shewanella oneidensis MR-1 Shewanella pealeana ATCC 700345 Shewanella piezotolerans WP3 Shewanella putrefaciens CN-32 Shewanella sediminis HAW-EB3 Shewanella sp. ANA-3 Shewanella sp. MR-4 Shewanella sp. MR-7 Shewanella sp. W3-18-1 Shewanella woodyi ATCC 51908 Sinorhizobium fredii NGR234 Sinorhizobium meliloti 1021 Sinorhizobium meliloti 2011 Sinorhizobium meliloti SM11 Sphingobium japonicum UT26S Sphingomonas wittichii RW1 Sphingopyxis alaskensis RB2256 Staphylococcus aureus subsp. aureus COL Staphylococcus aureus subsp. aureus N315 Staphylococcus aureus subsp. aureus NCTC 8325 Staphylococcus aureus subsp. aureus str. Newman Staphylococcus capitis SK14 Staphylococcus carnosus subsp. carnosus TM300 Staphylococcus epidermidis ATCC 12228 Staphylococcus haemolyticus JCSC1435 Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Stenotrophomonas maltophilia K279a Streptococcus agalactiae Streptococcus agalactiae 2603V/R Streptococcus agalactiae A909 Streptococcus agalactiae NEM316 Streptococcus cristatus AS 1.3089 Streptococcus dysgalactiae subsp. equisimilis GGS_124 Streptococcus equi subsp. zooepidemicus MGCS10565 Streptococcus gallolyticus UCN34 Streptococcus gordonii str. Challis substr. CH1 Streptococcus intermedius JTH08 Streptococcus lutetiensis 033 Streptococcus mitis B6 Streptococcus mutans UA159 Streptococcus pneumoniae D39 Streptococcus pneumoniae R6 Streptococcus pneumoniae TIGR4 Streptococcus pyogenes HSC5 Streptococcus pyogenes M1 GAS Streptococcus pyogenes MGAS10394 Streptococcus pyogenes MGAS10750 Streptococcus pyogenes MGAS315 Streptococcus pyogenes MGAS5005 Streptococcus pyogenes NZ131 Streptococcus salivarius 57.I Streptococcus sanguinis SK36 Streptococcus suis 05ZYH33 Streptococcus suis P1/7 Streptococcus thermophilus CNRZ1066 Streptococcus thermophilus LMD-9 Streptococcus uberis 0140J Streptomyces avermitilis MA-4680 = NBRC 14893 Streptomyces coelicolor A3(2) Streptomyces flavovirens Streptomyces griseus subsp. griseus NBRC 13350 Streptomyces scabiei 87.22 Sulfitobacter sp. EE-36 Sulfolobus acidocaldarius DSM 639 Sulfolobus islandicus Y.N.15.51 Sulfurisphaera tokodaii str. 7 Synechococcus elongatus PCC 7942 Synechococcus sp. JA-3-3Ab Synechococcus sp. PCC 7002 Synechococcus sp. WH 8102 Synechocystis sp. PCC 6803

Teredinibacter turnerae T7901 Thauera sp. MZ1T Thermoanaerobacter italicus Ab9 Thermoanaerobacter sp. X514 Thermococcus gammatolerans EJ3 Thermococcus kodakarensis KOD1 Thermococcus onnurineus NA1 Thermococcus sibiricus MM 739 Thermoplasma acidophilum DSM 1728 Thermosipho africanus TCF52B Thermosipho melanesiensis BI429 Thermosynechococcus elongatus BP-1 Thermotoga maritima MSB8 Thermotoga naphthophila RKU-10 Thermotoga neapolitana DSM 4359 Thermotoga petrophila RKU-1 Thermotoga sp. RQ2 Thermus aquaticus Y51MC23 Thermus thermophilus HB27 Thermus thermophilus HB8 Thiobacillus denitrificans Tolumonas auensis DSM 9187 Trichodesmium erythraeum IMS101 Tyzzerella nexilis DSM 1787

Variovorax paradoxus S110 Verminephrobacter eiseniae EF01-2 Vibrio anguillarum 775 Vibrio campbellii ATCC BAA-1116 Vibrio cholerae MJ-1236 Vibrio cholerae O1 biovar El Tor str. N16961 Vibrio cholerae O395 Vibrio parahaemolyticus RIMD 2210633 Vibrio shilonii AK1 Vibrio tasmaniensis LGP32 Vibrio vulnificus CMCP6 Vibrio vulnificus MO6-24/O Vibrio vulnificus YJ016

Xanthobacter autotrophicus Py2 Xanthomonas axonopodis Xac29-1 Xanthomonas campestris pv. campestris str. 8004 Xanthomonas campestris pv. campestris str. ATCC 33913 Xanthomonas campestris pv. vesicatoria str. 85-10 Xanthomonas citri pv. citri str. 306 Xanthomonas oryzae pv. oryzae KACC 10331 Xanthomonas oryzae pv. oryzae MAFF 311018 Xylella fastidiosa 9a5c

Yersinia enterocolitica subsp. enterocolitica 8081 Yersinia pestis CO92 Yersinia pestis KIM10+ Yersinia pestis biovar Microtus str. 91001 Yersinia pseudotuberculosis IP 32953 Yersinia pseudotuberculosis YPIII Yoonia vestfoldensis SKA53

Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821